HIV Newborn (HIV Newborn)
- Status: active
- How to create a CSV file for this data collection?
- Start date: 09/04/2020
1 Identification
Codepat of the patient
Technical specs
CSV column name:
CODEPAT
Length:
13
Required:
true
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.Patient
Data element:
PatientIdentificationNumber
National registry ID of the patient
Help
Please encode a social security identification number (SSIN). Please note that the patient ID is always pseudonymised before being transferred to Healthdata.
Technical specs
CSV column name:
patient_id
Required:
true
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.Patient
Data element:
PatientIdentificationNumber
Validation
The validity of the national register number is checked with the mod97 check.
Fields
Section help
Please encode a social security identification number (SSIN). Please note that the patient ID is always pseudonymised before being transferred to Healthdata.
Internal patient ID
Help
This field can be used to enter an internal ID or reference number. It is available for internal use only and is not transferred to Healthdata. If there is an integration between HD4DP and your organisation's patient administration system, additional patient identification information such as date of birth, sex and SSIN can be automatically enriched based on this internal patient ID. Please do not encode the social security identification number (SSIN) in this field. The SSIN must be encoded in the field 'National registry ID of the patient'.
Technical specs
CSV column name:
patient_id|internal_patient_id
Required:
false
Generated
Help
The patient_id|generated column can be set to 'TRUE' for an automatically generated patient_id.This column should only be added in case the patient_id is empty. If the column is set to 'TRUE', a patient_id is automatically generated based on the name, first name, date of birth and sex of the patient.
Technical specs
CSV column name:
patient_id|generated
Required:
false
Options
| Label | Value |
| Yes | TRUE |
| No | FALSE |
Name
Help
The name of the patient is never transferred to Healthdata and is available for your information only.
Technical specs
CSV column name:
patient_id|name
Length:
50
Required:
noSSIN(Needed only if no national register number is entered)
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.Patient
Data element:
LastName
First name
Help
The first name of the patient is never transferred and is available for your information only.
Technical specs
CSV column name:
patient_id|first_name
Length:
50
Required:
noSSIN(Needed only if no national register number is entered)
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.Patient
Data element:
FirstNames
Date of birth
Help
Day unknown: the date should be recorded as the 15th of the month – so that ??/12/1999 is coded 15/12/1999. This enables the date to be no more than 15 days away from the actual date. Month and day unknown: Similar approach as for unknown days, use of the date of mid-year - so that that ??/??/1999 is coded 01/07/1999. Date (including year) unknown and required, use of a fictive date that couldn’t be mistaken with an actual date: 11/11/1911.
Technical specs
Format:
DD/MM/YYYY
CSV column name:
patient_id|date_of_birth
Required:
true
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.Patient
Data element:
DateOfBirth
Validation
- The date of birth cannot be in the future (error)
- Date of sampling cannot be before date of birth (error)
- The date of birth needs to be after 30 September 2012 (warning)
Sex
Technical specs
CSV column name:
patient_id|sex
Required:
true
Options
| Label | Value |
| Female | F |
| Male | M |
| Unknown | U |
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.Patient
Data element:
Gender
Place of residence
Technical specs
CSV column name:
patient_id|place_of_residence
Length:
5
Reference list:
POSTAL_CODE
Required:
true
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.Patient
Data element:
Postcode
Deceased?
Technical specs
CSV column name:
patient_id|deceased
Required:
false
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.Patient
Data element:
DeathIndicator
Options
| Label | Value |
| Yes | TRUE |
| No | FALSE |
Date of death
Technical specs
Format:
DD/MM/YYYY
CSV column name:
patient_id|date_of_death
Only when:
Required:
false
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.Patient
Data element:
DateOfDeath
Date of birth of the mother
Help
Day unknown: the date should be recorded as the 15th of the month – so that ??/12/1999 is coded 15/12/1999. This enables the date to be no more than 15 days away from the actual date. Month and day unknown: Similar approach as for unknown days, use of the date of mid-year - so that that ??/??/1999 is coded 01/07/1999. Date (including year) unknown and required, use of a fictive date that couldn’t be mistaken with an actual date: 11/11/1911.
Technical specs
Format:
DD/MM/YYYY
CSV column name:
DT_DOB_MOTH
Required:
true
2 Data on the sample
Type of HIV
Technical specs
CSV column name:
CD_HIV_TPE
Required:
true
Options
| Label | Value |
| Human immunodeficiency virus I infection | HIV1 |
| Human immunodeficiency virus II infection | HIV2 |
| Unknown | UNK |
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.TransferConcern
Data element:
ProblemName
Date of sampling
Technical specs
Format:
DD/MM/YYYY
CSV column name:
DT_SDATES
Required:
true
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.TransferLaboratoryResult
Data element:
TestDateTime
Validation
- The date of sampling cannot be in the future (error)
- Date of sampling cannot be before date of birth (error)
Specimen type
Technical specs
CSV column name:
CD_SPECIM
Required:
false
Options
| Label | Value |
| Blood specimen | B |
| Cerebrospinal fluid sample | CSF |
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.TransferLaboratoryResult
Data element:
SpecimenMaterial
Type of NA
Technical specs
CSV column name:
CD_NAC_TPE
Required:
true
Options
| Label | Value |
| RNA | 1 |
| DNA | 2 |
| Total NA | 3 |
Type of viral assay used for the measurement
Technical specs
CSV column name:
RNA_ASSAY
Required:
true
Options
| Label | Value |
| 211 - NucliSENS EasyQ HIV-1 v1.1 | 211 |
| 212 - Aptima HIV-1 Quant Dx assay (Hologic) | 212 |
| 35 - VERSANT HIV-1 RNA 1.0 Assay (kPCR) (Siemens) | 35 |
| 36 - VERSANT HIV-1 RNA 1.5 Assay (kPCR) (Siemens) | 36 |
| 42 - Abbott RealTime HIV-1 m2000 | 42 |
| 67 - Cobas AmpliPrep/Cobas TaqMan HIV-1 Test, v2.0 (Roche) | 67 |
| 68 - Cobas HIV-1 (Roche Cobas 6800/8800 systems) | 68 |
| 69 - Roche Cobas 4800 | 69 |
| 70 - Xpert HIV-1 Viral Load (Cepheid) | 70 |
| 71 - Xpert HIV-1 Qual (Cepheid) | 71 |
| 73 - Alinity m HIV-1 Assay (Abbott) | 73 |
| 75 - Artus HIV-1 QS-RGQ | 75 |
| 80 - Generic HIV Charge Virale (Biocentric) | 80 |
| 85 - ExavirLoad (Cavidi) | 85 |
| 90 - Other | 90 |
| 91 - RNA-other | 91 |
| 92 - DNA-other | 92 |
| 93 - NA-other | 93 |
| 99 - Unknown | 99 |
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.TransferLaboratoryResult
Data element:
TestName
Value of measurement
Technical specs
CSV column name:
CD_VALUE_MSMENT
Required:
true
Options
| Label | Value |
| Negative: HIV NA not detected | NEG |
| Positive: HIV NA detected | POS |
| Indeterminate | IND |
| Unknown | UNK |
Mapping of the clinical building blocks (indicative only)
Concept:
be.en.hd.TransferLaboratoryResult
Data element:
Result